Package jaligner.matrix

Scoring matrices package.

See:
Description

Class Summary

MatricesCompartor	Comparator to sort the scoring matrices by their names.
Matrix	Scoring matrix.
MatrixGenerator	A utility class to generate a scoring matrix from a fixed match and mismatch scoring scheme.
MatrixLoader	Scoring matrices loader from a jar file or a file system.

Exception Summary

MatrixLoaderException

Package jaligner.matrix Description

Scoring matrices package.

Author:

Ahmed Moustafa (ahmed@users.sf.net)