jaligner.formats
Class Pair

java.lang.Object
  jaligner.formats.Format
      jaligner.formats.Pair

public class Pair

extends Format

Pair format.

Author:

Ahmed Moustafa (ahmed@users.sf.net)

Constructor Summary

Pair()
Constructor

Method Summary

java.lang.String

format(Alignment alignment) Formats an alignment object to the Pair_FORMAT format

Methods inherited from class jaligner.formats.Format

getId, setId

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Pair

public Pair()

Constructor

Method Detail

format

public java.lang.String format(Alignment alignment)

Formats an alignment object to the Pair_FORMAT format

Specified by:

format in class Format

Parameters:

alignment - alignment object to be formated

Returns:

string of the alignment pair-formatted

See Also:

Alignment