Uses of Package
jaligner

Packages that use jaligner

jaligner	Core classes for the implementation of Smith-Waterman-Gotoh algorithm
jaligner.formats	Group of formats for output alignments.
jaligner.util	Utility classes for helping core and GUI classes.

Classes in jaligner used by jaligner

Alignment
Holds the output of a pairwise sequences alignment.

Sequence
A basic (nucleic or protein) sequence.

Classes in jaligner used by jaligner.formats

Alignment
Holds the output of a pairwise sequences alignment.

Sequence
A basic (nucleic or protein) sequence.

Classes in jaligner used by jaligner.util

Sequence
A basic (nucleic or protein) sequence.